3E3I Lyase date Aug 07, 2008
title H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With 100 Bicarbonate
authors R.S.Rowlett, H.Failing
compound source
Molecule: Carbonic Anhydrase 2
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Synonym: Carbonate Dehydratase 2; Beta Carbonic Anhydrase
Ec: 4.2.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Haemophilus Influenzae
Organism_taxid: 727
Gene: Can, Hi1301
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptrc99
symmetry Space Group: C 1 2 1
R_factor 0.201 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
229.593 144.437 104.891 90.00 94.43 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand BCT, SO4, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceEvidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase ., Rowlett RS, Hoffmann KM, Failing H, Mysliwiec MM, Samardzic D, Biochemistry. 2010 May 4;49(17):3640-7. PMID:20359198
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (418 Kb) [Save to disk]
  • Biological Unit Coordinates (3e3i.pdb1.gz) 140 Kb
  • Biological Unit Coordinates (3e3i.pdb2.gz) 142 Kb
  • Biological Unit Coordinates (3e3i.pdb3.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 3E3I
  • CSU: Contacts of Structural Units for 3E3I
  • Structure Factors (3420 Kb)
  • Retrieve 3E3I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E3I from S2C, [Save to disk]
  • Re-refined 3e3i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3E3I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3E3I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E3I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e3i_C] [3e3i_A] [3e3i_B] [3e3i_D] [3e3i] [3e3i_K] [3e3i_E] [3e3i_H] [3e3i_L] [3e3i_G] [3e3i_J] [3e3i_F] [3e3i_I]
  • SWISS-PROT database: [P45148]
  • Domain organization of [CAN_HAEIN] by SWISSPFAM
  • Domain found in 3E3I: [Pro_CA ] by SMART
  • Other resources with information on 3E3I
  • Community annotation for 3E3I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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