3E4G Electron Transport date Aug 11, 2008
title Crystal Structure Of Bovine Coupling Factor B, G28e Mutant
authors R.M.Stroud, J.K.Lee, G.I.Belogrudov
compound source
Molecule: Atp Synthase Subunit S, Mitochondrial
Chain: A
Synonym: Atp Synthase-Coupling Factor B, Mitochondrial Atp Regulatory Component Factor B;
Ec: 3.6.3.14
Engineered: Yes
Mutation: Yes
Organism_scientific: Bos Taurus
Organism_taxid: 9913
Gene: Atp5s, Atpw
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet43
symmetry Space Group: C 1 2 1
R_factor 0.143 R_Free 0.164
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.476 50.010 36.886 90.00 109.37 90.00
method X-Ray Diffractionresolution 0.96 Å
ligand MG, TRS enzyme Hydrolase E.C.3.6.3.14 BRENDA
Primary referenceCrystal structure of bovine mitochondrial factor B at 0.96-A resolution., Lee JK, Belogrudov GI, Stroud RM, Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13379-84. Epub 2008 Sep 3. PMID:18768789
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (3e4g.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 3E4G
  • CSU: Contacts of Structural Units for 3E4G
  • Likely Quarternary Molecular Structure file(s) for 3E4G
  • Structure Factors (629 Kb)
  • Retrieve 3E4G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E4G from S2C, [Save to disk]
  • Re-refined 3e4g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3E4G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3E4G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E4G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e4g_A] [3e4g]
  • SWISS-PROT database: [P22027]
  • Domain organization of [ATP5S_BOVIN] by SWISSPFAM
  • Other resources with information on 3E4G
  • Community annotation for 3E4G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science