3E8M		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACY, CL, EDO, MG, PEG, PG4, PGE	enzyme
note	3E8M is a representative structure
Gene	BT
Gene Ontology	Chain Function Process Component B, D, A, C
Primary reference	Structure-Function Analysis of 2-Keto-3-deoxy-D-glycero-D-galactonononate-9-phosphate Phosphatase Defines Specificity Elements in Type C0 Haloalkanoate Dehalogenase Family Members., Lu Z, Wang L, Dunaway-Mariano D, Allen KN, J Biol Chem. 2009 Jan 9;284(2):1224-33. Epub 2008 Nov 5. PMID:18986982

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (373 Kb) [Save to disk] Biological Unit Coordinates (3e8m.pdb1.gz) 366 Kb Biological Unit Coordinates (3e8m.pdb2.gz) 728 Kb LPC: Ligand-Protein Contacts for 3E8M CSU: Contacts of Structural Units for 3E8M Likely Quarternary Molecular Structure file(s) for 3E8M Structure Factors (8050 Kb) Retrieve 3E8M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3E8M from S2C, [Save to disk] Re-refined 3e8m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3E8M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3e8m] [3e8m_A] [3e8m_B] [3e8m_C] [3e8m_D] SWISS-PROT database: [Q8A712]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---