3EQR	Transferase	date	Oct 01, 2008
title	Crystal Structure Of Ack1 With Compound T74
authors	J.Liu, Z.Wang, N.P.C.Walker
compound		source
Molecule: Activated Cdc42 Kinase 1 Chain: A, B Fragment: Unp Residues 117-392 Synonym: Ack-1, Tyrosine Kinase Non-Receptor Protein 2 Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tnk2, Ack1 Expression_system: Insect Cells
symmetry	Space Group: P 1 21 1	R_factor 0.210 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.785 42.915 92.832 90.00 99.67 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CL, T74 BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Identification and optimization of N3,N6-diaryl-1H-pyrazolo[3,4-d]pyrimidine-3,6-diamines as a novel class of ACK1 inhibitors., Kopecky DJ, Hao X, Chen Y, Fu J, Jiao X, Jaen JC, Cardozo MG, Liu J, Wang Z, Walker NP, Wesche H, Li S, Farrelly E, Xiao SH, Kayser F, Bioorg Med Chem Lett. 2008 Dec 15;18(24):6352-6. Epub 2008 Nov 1. PMID:18993068

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk] Biological Unit Coordinates (3eqr.pdb1.gz) 93 Kb Biological Unit Coordinates (3eqr.pdb2.gz) 48 Kb Biological Unit Coordinates (3eqr.pdb3.gz) 47 Kb LPC: Ligand-Protein Contacts for 3EQR CSU: Contacts of Structural Units for 3EQR Likely Quarternary Molecular Structure file(s) for 3EQR Structure Factors (612 Kb) Retrieve 3EQR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3EQR from S2C, [Save to disk] Re-refined 3eqr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EQR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3EQR

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3EQR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3eqr] [3eqr_B] [3eqr_] [3eqr_A] SWISS-PROT database: [Q07912] Domain organization of [ACK1_HUMAN] by SWISSPFAM Domain found in 3EQR: [TyrKc ] by SMART

Other resources with information on 3EQR

Community annotation for 3EQR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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