3EU4	Oxidoreductase	date	Oct 09, 2008
title	Crystal Structure Of Bdbd From Bacillus Subtilis (Oxidised)
authors	A.Crow, M.C.Moller, L.Hederstedt, N.Le Brun
compound		source
Molecule: Bdbd Chain: A Synonym: Bacillus Disulfide Bond Protein D Engineered: Yes		Organism_scientific: Bacillus Subtilis Organism_taxid: 1423 Gene: Bdbd, Bsu33480, Yvgv Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21a-Based
symmetry	Space Group: P 1 21 1	R_factor 0.193 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.863 43.113 54.718 90.00 107.50 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	CA	enzyme
Primary reference	Crystal Structure and Biophysical Properties of Bacillus subtilis BdbD: AN OXIDIZING THIOL:DISULFIDE OXIDOREDUCTASE CONTAINING A NOVEL METAL SITE., Crow A, Lewin A, Hecht O, Carlsson Moller M, Moore GR, Hederstedt L, Le Brun NE, J Biol Chem. 2009 Aug 28;284(35):23719-33. Epub 2009 Jun 17. PMID:19535335

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (3eu4.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 3EU4 CSU: Contacts of Structural Units for 3EU4 Likely Quarternary Molecular Structure file(s) for 3EU4 Structure Factors (330 Kb) Retrieve 3EU4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3EU4 from S2C, [Save to disk] Re-refined 3eu4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EU4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3EU4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3EU4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3eu4_A] [3eu4] SWISS-PROT database: [O32218] Domain organization of [BDBD_BACSU] by SWISSPFAM

Other resources with information on 3EU4

Community annotation for 3EU4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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