3EYX Lyase date Oct 22, 2008
title Crystal Structure Of Carbonic Anhydrase Nce103 From Saccharo Cerevisiae
authors Y.B.Teng, Y.L.Jiang, Y.Chen, C.Z.Zhou
compound source
Molecule: Carbonic Anhydrase
Chain: A, B
Fragment: Residues 14-221
Synonym: Beta-Carbonic Anhydrase, Carbonate Dehydratase, No Classical Export Protein 3;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Strain: S288c
Gene: Nce103
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P29
symmetry Space Group: C 2 2 21
R_factor 0.197 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.570 155.730 89.690 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.04 Å
ligand ACT, EDO, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural insights into the substrate tunnel of Saccharomyces cerevisiae carbonic anhydrase Nce103., Teng YB, Jiang YL, He YX, He WW, Lian FM, Chen Y, Zhou CZ, BMC Struct Biol. 2009 Oct 24;9:67. PMID:19852838
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3eyx.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3EYX
  • CSU: Contacts of Structural Units for 3EYX
  • Structure Factors (1336 Kb)
  • Retrieve 3EYX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EYX from S2C, [Save to disk]
  • Re-refined 3eyx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EYX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EYX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EYX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eyx_B] [3eyx_A] [3eyx]
  • SWISS-PROT database: [P53615]
  • Domain organization of [CAN_YEAST] by SWISSPFAM
  • Domain found in 3EYX: [Pro_CA ] by SMART
  • Other resources with information on 3EYX
  • Community annotation for 3EYX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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