3F0D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
note 3F0D is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, C, E, F


Primary referenceCombining functional and structural genomics to sample the essential Burkholderia structome., Baugh L, Gallagher LA, Patrapuvich R, Clifton MC, Gardberg AS, Edwards TE, Armour B, Begley DW, Dieterich SH, Dranow DM, Abendroth J, Fairman JW, Fox D 3rd, Staker BL, Phan I, Gillespie A, Choi R, Nakazawa-Hewitt S, Nguyen MT, Napuli A, Barrett L, Buchko GW, Stacy R, Myler PJ, Stewart LJ, Manoil C, Van Voorhis WC, PLoS One. 2013;8(1):e53851. doi: 10.1371/journal.pone.0053851. Epub 2013 Jan 31. PMID:23382856
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (3f0d.pdb1.gz) 145 Kb
  • Biological Unit Coordinates (3f0d.pdb2.gz) 145 Kb
  • LPC: Ligand-Protein Contacts for 3F0D
  • CSU: Contacts of Structural Units for 3F0D
  • Likely Quarternary Molecular Structure file(s) for 3F0D
  • Structure Factors (3909 Kb)
  • Retrieve 3F0D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F0D from S2C, [Save to disk]
  • Re-refined 3f0d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3F0D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f0d] [3f0d_A] [3f0d_B] [3f0d_C] [3f0d_D] [3f0d_E] [3f0d_F]
  • SWISS-PROT database: [Q63T71]

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