3F2E	Viral Protein	date	Oct 29, 2008
title	Crystal Structure Of Yellowstone Sirv Coat Protein C-Terminu
authors	R.E.Taurog, B.R.Szymczyna, J.R.Williamson, J.E.Johnson
compound		source
Molecule: Sirv Coat Protein Chain: A Fragment: C-Terminal Domain Engineered: Yes		Organism_scientific: Sulfolobus Islandicus Rudivirus 1 Vari Organism_taxid: 187213 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet31a
symmetry	Space Group: P 43 21 2	R_factor 0.184 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.410 54.410 77.790 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.67 Å
ligand	CIT	enzyme
Primary reference	Synergy of NMR, computation, and X-ray crystallography for structural biology., Szymczyna BR, Taurog RE, Young MJ, Snyder JC, Johnson JE, Williamson JR, Structure. 2009 Apr 15;17(4):499-507. PMID:19368883

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk] Biological Unit Coordinates (3f2e.pdb1.gz) 15 Kb LPC: Ligand-Protein Contacts for 3F2E CSU: Contacts of Structural Units for 3F2E Likely Quarternary Molecular Structure file(s) for 3F2E Structure Factors (91 Kb) Retrieve 3F2E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F2E from S2C, [Save to disk] Re-refined 3f2e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F2E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3F2E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F2E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f2e] [3f2e_A] SWISS-PROT database: [D0VX05] Domain organization of [D0VX05_9VIRU] by SWISSPFAM

Other resources with information on 3F2E

Community annotation for 3F2E at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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