3F3H	Antitumor Protein	date	Oct 30, 2008
title	Crystal Structure And Anti-Tumor Activity Of Lz-8 From The F Ganoderma Lucidium
authors	C.Z.Zhou, L.Huang, Y.X.He, R.Bao, F.Sun, C.Liang, L.Liu
compound		source
Molecule: Immunomodulatory Protein Ling Zhi-8 Chain: A, B Synonym: Lz-8 Engineered: Yes		Organism_scientific: Ganoderma Lucidum Organism_common: Bracket Fungus Organism_taxid: 5315 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: Gs115 Expression_system_vector_type: Plasmid Expression_system_plasmid: P819
symmetry	Space Group: P 21 21 21	R_factor 0.221 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 33.190 86.990 92.130 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of LZ-8 from the medicinal fungus Ganoderma lucidium., Huang L, Sun F, Liang C, He YX, Bao R, Liu L, Zhou CZ, Proteins. 2009 May 1;75(2):524-7. PMID:19137616

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (3f3h.pdb1.gz) 36 Kb CSU: Contacts of Structural Units for 3F3H Structure Factors (793 Kb) Retrieve 3F3H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F3H from S2C, [Save to disk] Re-refined 3f3h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F3H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3F3H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F3H, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f3h_A] [3f3h_B] [3f3h] SWISS-PROT database: [P14945] Domain organization of [LZ8_GANLU] by SWISSPFAM

Other resources with information on 3F3H

Community annotation for 3F3H at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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