3F5O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, COA, P6G, UOC enzyme
note 3F5O is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
C, B, E, H, D, A, G, F


Primary referenceThe mechanisms of human hotdog-fold thioesterase 2 (hTHEM2) substrate recognition and catalysis illuminated by a structure and function based analysis., Cao J, Xu H, Zhao H, Gong W, Dunaway-Mariano D, Biochemistry. 2009 Feb 17;48(6):1293-304. PMID:19170545
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (3f5o.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (3f5o.pdb2.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 3F5O
  • CSU: Contacts of Structural Units for 3F5O
  • Structure Factors (1714 Kb)
  • Retrieve 3F5O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F5O from S2C, [Save to disk]
  • Re-refined 3f5o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F5O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f5o] [3f5o_A] [3f5o_B] [3f5o_C] [3f5o_D] [3f5o_E] [3f5o_F] [3f5o_G] [3f5o_H]
  • SWISS-PROT database: [Q9NPJ3]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science