3F5T X-ray Structure of H5N1 NS1 date
authors Bornholdt, Z.A., Prasad, B.V.V.
compound source
R_Free 0.296
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
note 3F5T supersedes 3EU6

Primary referenceX-ray structure of NS1 from a highly pathogenic H5N1 influenza virus., Bornholdt ZA, Prasad BV, Nature. 2008 Nov 5. PMID:18987632
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (3f5t.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (3f5t.pdb2.gz) 58 Kb
  • CSU: Contacts of Structural Units for 3F5T
  • Likely Quarternary Molecular Structure file(s) for 3F5T
  • Structure Factors (46 Kb)
  • Retrieve 3F5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F5T from S2C, [Save to disk]
  • Re-refined 3f5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3F5T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F5T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f5t_A] [3f5t]
  • SWISS-PROT database: [A5A5U1]
  • Domain organization of [A5A5U1_9INFA] by SWISSPFAM
  • Other resources with information on 3F5T
  • Community annotation for 3F5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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