3F6K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, GOL, NAG, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceLigands bind to Sortilin in the tunnel of a ten-bladed beta-propeller domain., Quistgaard EM, Madsen P, Groftehauge MK, Nissen P, Petersen CM, Thirup SS, Nat Struct Mol Biol. 2009 Jan;16(1):96-8. Epub 2009 Jan 4. PMID:19122660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (3f6k.pdb1.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 3F6K
  • CSU: Contacts of Structural Units for 3F6K
  • Likely Quarternary Molecular Structure file(s) for 3F6K
  • Structure Factors (525 Kb)
  • Retrieve 3F6K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F6K from S2C, [Save to disk]
  • Re-refined 3f6k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3F6K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f6k] [3f6k_A] [3f6k_N]
  • SWISS-PROT database: [P30990] [Q99523]
  • Belongs to the retromer-dependent vacuolar protein sorting (r-vps) family according to TCDB.
  • Domain found in 3F6K: [VPS10 ] by SMART

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