OCA Atlas for 3F71

3F71

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CSO

enzyme

Gene
Ontology

Chain	Function	Process	Component
A	transcription coactivator ac... peroxiredoxin activity glyoxalase (glycolic acid-fo...	synaptic transmission, dopam... negative regulation of prote... positive regulation of pepti... dopamine uptake involved in ... positive regulation of L-dop...

Primary reference

Formation of a Stabilized Cysteine Sulfinic Acid Is Critical for the Mitochondrial Function of the Parkinsonism Protein DJ-1., Blackinton J, Lakshminarasimhan M, Thomas KJ, Ahmad R, Greggio E, Raza AS, Cookson MR, Wilson MA, J Biol Chem. 2009 Mar 6;284(10):6476-85. Epub 2009 Jan 5. PMID:19124468

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]

Biological Unit Coordinates (3f71.pdb1.gz) 135 Kb

LPC: Ligand-Protein Contacts for 3F71

CSU: Contacts of Structural Units for 3F71

Likely Quarternary Molecular Structure file(s) for 3F71

Structure Factors (567 Kb)

Retrieve 3F71 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3F71 from S2C, [Save to disk]

Re-refined 3f71 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F71 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f71] [3f71_A]

SWISS-PROT database: [Q99497]

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