3FF1 Isomerase date Dec 01, 2008
title Structure Of Glucose 6-Phosphate Isomerase From Staphylococc
authors S.M.Anderson, J.S.Brunzelle, O.Onopriyenko, S.Peterson, W.F.Ande A.Savchenko, Center For Structural Genomics Of Infectious Di (Csgid)
compound source
Molecule: Glucose-6-Phosphate Isomerase
Chain: A, B
Synonym: Gpi, Phosphoglucose Isomerase, Pgi, Phosphohexose Phi;
Ec: 5.3.1.9
Engineered: Yes
Organism_scientific: Staphylococcus Aureus Subsp. Aureus
Organism_taxid: 93062
Strain: Col
Gene: Pgi, Sacol0966
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.146 R_Free 0.170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
163.267 163.267 103.732 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand G6Q, MSE, NA enzyme Isomerase E.C.5.3.1.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (3ff1.pdb1.gz) 170 Kb
  • Biological Unit Coordinates (3ff1.pdb2.gz) 340 Kb
  • Biological Unit Coordinates (3ff1.pdb3.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 3FF1
  • CSU: Contacts of Structural Units for 3FF1
  • Likely Quarternary Molecular Structure file(s) for 3FF1
  • Structure Factors (3469 Kb)
  • Retrieve 3FF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FF1 from S2C, [Save to disk]
  • Re-refined 3ff1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FF1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FF1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ff1] [3ff1_A] [3ff1_B]
  • SWISS-PROT database: [Q5HHC2]
  • Domain organization of [G6PI_STAAC] by SWISSPFAM
  • Other resources with information on 3FF1
  • Community annotation for 3FF1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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