3FFL Cell Cycle date Dec 03, 2008
title Crystal Structure Of The N-Terminal Domain Of Anaphase-Promo Complex Subunit 7
authors D.Han, K.Kim, Y.Kim, Y.Kim
compound source
Molecule: Anaphase-Promoting Complex Subunit 7
Chain: A, B, C, D
Fragment: N-Terminal Domain
Synonym: Apc7, Cyclosome Subunit 7
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Anapc7, Apc7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 1 21 1
R_factor 0.216 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.493 64.076 81.597 90.00 95.23 90.00
method X-Ray Diffractionresolution 2.50 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (3ffl.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (3ffl.pdb2.gz) 39 Kb
  • CSU: Contacts of Structural Units for 3FFL
  • Likely Quarternary Molecular Structure file(s) for 3FFL
  • Structure Factors (492 Kb)
  • Retrieve 3FFL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FFL from S2C, [Save to disk]
  • Re-refined 3ffl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FFL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3FFL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FFL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ffl_B] [3ffl_C] [3ffl_A] [3ffl] [3ffl_D]
  • SWISS-PROT database: [Q9UJX3]
  • Domain organization of [APC7_HUMAN] by SWISSPFAM
    • Other resources with information on 3FFL
  • Community annotation for 3FFL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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