3FGW	Hydrolase	date	Dec 08, 2008
title	One Chain Form Of The 66.3 Kda Protein
authors	K.Lakomek, A.Dickmanns, R.Ficner
compound		source
Molecule: Putative Phospholipase B-Like 2 Chain: A Synonym: 66.3 Kda Protein, Lamina Ancestor Homolog 2, Lama- Protein 2, 76 Kda Protein, P76, Putative Phospholipase B-Li Kda Form, Putative Phospholipase B-Like 2 40 Kda Form, Puta Phospholipase B-Like 2 15 Kda Form; Ec: 3.1.1.- Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Strain: C3hrv Gene: Aag44101 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Ht1080 Expression_system_cell: Fibrosarcoma Cell Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdna3.1hygro(+)
symmetry	Space Group: C 1 2 1	R_factor 0.223 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 146.690 88.110 73.550 90.00 111.10 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	BMA, GOL, IOD, NA, NAG	enzyme	Hydrolase E.C.3.1.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography., Lakomek K, Dickmanns A, Kettwig M, Urlaub H, Ficner R, Lubke T, BMC Struct Biol. 2009 Aug 25;9:56. PMID:19706171

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (3fgw.pdb1.gz) 176 Kb LPC: Ligand-Protein Contacts for 3FGW CSU: Contacts of Structural Units for 3FGW Structure Factors (1176 Kb) Retrieve 3FGW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FGW from S2C, [Save to disk] Re-refined 3fgw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FGW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FGW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FGW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fgw_A] [3fgw] SWISS-PROT database: [Q3TCN2] Domain organization of [PLBL2_MOUSE] by SWISSPFAM

Other resources with information on 3FGW

Community annotation for 3FGW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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