3FOV Structural Genomics, Unknown Function date Jan 02, 2009
title Crystal Structure Of Protein Rpa0323 Of Unknown Function Fro Rhodopseudomonas Palustris
authors J.Osipiuk, T.Skarina, O.Kagan, A.Savchenko, A.M.Edwards, A.Joachi Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Upf0102 Protein Rpa0323
Chain: A
Engineered: Yes
 Organism_scientific: Rhodopseudomonas Palustris
Organism_taxid: 258594
Strain: Cga009
Atcc: Baa-98
Gene: Rpa0323
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b Modified
symmetry Space Group: C 1 2 1
R_factor 0.188 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.341 44.747 32.661 90.00 108.62 90.00
method X-Ray Diffractionresolution 1.88 Å
ligand MSE, NO3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (3fov.pdb1.gz) 37 Kb
  • Biological Unit Coordinates (3fov.pdb2.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 3FOV
  • CSU: Contacts of Structural Units for 3FOV
  • Likely Quarternary Molecular Structure file(s) for 3FOV
  • Structure Factors (133 Kb)
  • Retrieve 3FOV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FOV from S2C, [Save to disk]
  • Re-refined 3fov structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FOV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3FOV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FOV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fov] [3fov_A]
  • SWISS-PROT database: [Q6NCZ4]
  • Domain organization of [Y323_RHOPA] by SWISSPFAM
    • Other resources with information on 3FOV
  • Community annotation for 3FOV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science