3FZO	Transferase	date	Jan 26, 2009
title	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
authors	S.Han
compound		source
Molecule: Protein Tyrosine Kinase 2 Beta Chain: A Fragment: Unp Residues 416-692, Protein Kinase Domain Synonym: Focal Adhesion Kinase 2, Fadk 2, Proline-Rich Tyro Kinase 2, Cell Adhesion Kinase Beta, Cak Beta, Calcium-Depe Tyrosine Kinase, Cadtk, Related Adhesion Focal Tyrosine Kin Raftk; Ec: 2.7.10.2		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.204 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.284 96.976 43.066 90.00 93.30 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand		enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural characterization of proline-rich tyrosine kinase 2 (PYK2) reveals a unique (DFG-out) conformation and enables inhibitor design., Han S, Mistry A, Chang JS, Cunningham D, Griffor M, Bonnette PC, Wang H, Chrunyk BA, Aspnes GE, Walker DP, Brosius AD, Buckbinder L, J Biol Chem. 2009 May 8;284(19):13193-201. Epub 2009 Feb 25. PMID:19244237

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (3fzo.pdb1.gz) 45 Kb CSU: Contacts of Structural Units for 3FZO Likely Quarternary Molecular Structure file(s) for 3FZO Structure Factors (114 Kb) Retrieve 3FZO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FZO from S2C, [Save to disk] Re-refined 3fzo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FZO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FZO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FZO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fzo] [3fzo_A] SWISS-PROT database: [Q14289] Domain organization of [FAK2_HUMAN] by SWISSPFAM Domain found in 3FZO: [TyrKc ] by SMART

Other resources with information on 3FZO

Community annotation for 3FZO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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