3G6S Hydrolase date Feb 08, 2009
title Crystal Structure Of The Endonucleaseexonucleasephosphatas (Bvu_0621) From Bacteroides Vulgatus. Northeast Structural Consortium Target Bvr56d
authors F.Forouhar, S.Lew, J.Seetharaman, R.Xiao, S.Sahdev, E.L.Foote, C.Ciccosanti, D.Wang, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomic Consortium (Nesg)
compound source
Molecule: Putative Endonucleaseexonucleasephosphatase Fam Protein;
Chain: A
Fragment: Unp Residues 22-280
Engineered: Yes
 Organism_scientific: Bacteroides Vulgatus Atcc 8482
Organism_taxid: 435590
Strain: Dsm 1447 Nctc 11154
Atcc: 8482
Gene: Bvu_0621
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 41
R_factor 0.180 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.601 75.601 66.715 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MSE enzyme
Gene BVU
Gene
Ontology
ChainFunctionProcessComponent
A
  • endonuclease activity
  • exonuclease activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3g6s.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 3G6S
  • CSU: Contacts of Structural Units for 3G6S
  • Likely Quarternary Molecular Structure file(s) for 3G6S
  • Structure Factors (372 Kb)
  • Retrieve 3G6S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3G6S from S2C, [Save to disk]
  • Re-refined 3g6s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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    • Visual 3D analysis of 3G6S
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
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  • 3D motif for 3G6S, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3g6s] [3g6s_A]
  • SWISS-PROT database: [A6KY15]
  • Domain organization of [A6KY15_BACV8] by SWISSPFAM
    • Other resources with information on 3G6S
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