3G7W Sugar Binding Protein, Hormone date Feb 11, 2009
title Islet Amyloid Polypeptide (Iapp Or Amylin) Residues 1 To 22 Maltose Binding Protein
authors J.J.W.Wiltzius, M.R.Sawaya, D.Eisenberg
compound source
Molecule: Maltose-Binding Periplasmic Protein, Islet Amyloi Polypeptide Fusion Protein;
Chain: A
Synonym: Mmbp, Maltodextrin-Binding Protein, Amylin, Diabet Associated Peptide, Dap, Insulinoma Amyloid Peptide;
Engineered: Yes
Organism_scientific: Escherichia Coli, Homo Sapiens
Organism_taxid: 83333, 9606
Gene: Male, B4034, Jw3994, Iapp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmal-A1
symmetry Space Group: P 41 21 2
R_factor 0.170 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.495 84.495 144.292 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand GLC, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • carbohydrate transmembrane t...


  • Primary referenceAtomic structures of IAPP (amylin) fusions suggest a mechanism for fibrillation and the role of insulin in the process., Wiltzius JJ, Sievers SA, Sawaya MR, Eisenberg D, Protein Sci. 2009 Apr 29. PMID:19475663
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (3g7w.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (3g7w.pdb2.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 3G7W
  • CSU: Contacts of Structural Units for 3G7W
  • Likely Quarternary Molecular Structure file(s) for 3G7W
  • Structure Factors (800 Kb)
  • Retrieve 3G7W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3G7W from S2C, [Save to disk]
  • Re-refined 3g7w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3G7W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3G7W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3G7W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3g7w] [3g7w_A]
  • SWISS-PROT database: [P10997] [P0AEX9]
  • Belongs to the atp-binding cassette (abc) superfamily according to TCDB.
  • Domain organization of [IAPP_HUMAN] [MALE_ECOLI] by SWISSPFAM
  • Other resources with information on 3G7W
  • Community annotation for 3G7W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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