3G9Z Hydrolase date Feb 16, 2009
title Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl Capr
authors K.Y.Hwang, K.H.Nam
compound source
Molecule: Esteraselipase
Chain: A
Synonym: Este5
Ec: 3.1.1.-
Engineered: Yes
 Organism_scientific: Uncultured Bacterium
Organism_taxid: 77133
Gene: Este5
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21a
symmetry Space Group: P 41 21 2
R_factor 0.189 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.896 60.896 145.368 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Hydrolase E.C.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (3g9z.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 3G9Z
  • Likely Quarternary Molecular Structure file(s) for 3G9Z
  • Structure Factors (106 Kb)
  • Retrieve 3G9Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3G9Z from S2C, [Save to disk]
  • Re-refined 3g9z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3G9Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3G9Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3G9Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3g9z] [3g9z_A]
  • SWISS-PROT database: [Q0GMU2]
  • Domain organization of [Q0GMU2_9BACT] by SWISSPFAM
    • Other resources with information on 3G9Z
  • Community annotation for 3G9Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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