3GG3	Transferase	date	Feb 27, 2009
title	Crystal Structure Of The Bromodomain Of Human Pcaf
authors	P.Filippakopoulos, T.Keates, S.Picaud, K.Rehana, O.Fedorov, E.Ugo F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C.Bountra, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Histone Acetyltransferase Pcaf Chain: A, B Fragment: Unp Residues 715-831 Synonym: Histone Acetylase Pcaf, P300cbp-Associated Factor Ec: 2.3.1.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pcaf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: H 3	R_factor 0.207 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.226 99.226 101.137 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	CL	enzyme	Transferase E.C.2.3.1.48 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Histone recognition and large-scale structural analysis of the human bromodomain family., Filippakopoulos P, Picaud S, Mangos M, Keates T, Lambert JP, Barsyte-Lovejoy D, Felletar I, Volkmer R, Muller S, Pawson T, Gingras AC, Arrowsmith CH, Knapp S, Cell. 2012 Mar 30;149(1):214-31. PMID:22464331

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (3gg3.pdb1.gz) 20 Kb Biological Unit Coordinates (3gg3.pdb2.gz) 20 Kb LPC: Ligand-Protein Contacts for 3GG3 CSU: Contacts of Structural Units for 3GG3 Likely Quarternary Molecular Structure file(s) for 3GG3 Structure Factors (280 Kb) Retrieve 3GG3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GG3 from S2C, [Save to disk] Re-refined 3gg3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GG3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GG3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GG3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gg3] [3gg3_B] [3gg3_A] SWISS-PROT database: [Q92831] Domain organization of [KAT2B_HUMAN] by SWISSPFAM Domain found in 3GG3: [BROMO ] by SMART

Other resources with information on 3GG3

Community annotation for 3GG3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---