3GGL Structural Genomics, Unknown Function date Feb 28, 2009
title X-Ray Structure Of The C-Terminal Domain (277-440) Of Putati Chitobiase From Bacteroides Thetaiotaomicron. Northeast Str Genomics Consortium Target Btr324a.
authors A.Kuzin, H.Neely, R.Seetharaman, D.Lee, C.Ciccosanti, E.L.Foote, H R.Xiao, R.Nair, B.Rost, T.Acton, J.K.Everett, G.T.Montelione, L.T J.Hunt, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Putative Chitobiase
Chain: A
Fragment: Residues 280-440
Engineered: Yes
 Organism_scientific: Bacteroides Thetaiotaomicron
Organism_taxid: 818
Gene: Bt_0865
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 21-23c
symmetry Space Group: P 32 2 1
R_factor 0.200 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.860 86.860 50.992 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand MSE, PEG, ZN enzyme
Gene BT
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (3ggl.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (3ggl.pdb2.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 3GGL
  • CSU: Contacts of Structural Units for 3GGL
  • Likely Quarternary Molecular Structure file(s) for 3GGL
  • Structure Factors (66 Kb)
  • Retrieve 3GGL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GGL from S2C, [Save to disk]
  • Re-refined 3ggl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GGL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3GGL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GGL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ggl_A] [3ggl]
  • SWISS-PROT database: [Q8A9F0]
  • Domain organization of [Q8A9F0_BACTN] by SWISSPFAM
    • Other resources with information on 3GGL
  • Community annotation for 3GGL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science