3GNM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, EDO enzyme
Primary referenceComputational Screening of the Human TF-Glycome Provides a Structural Definition for the Specificity of Anti-Tumor Antibody JAA-F11., Tessier MB, Grant OC, Heimburg-Molinaro J, Smith D, Jadey S, Gulick AM, Glushka J, Deutscher SL, Rittenhouse-Olson K, Woods RJ, PLoS One. 2013;8(1):e54874. doi: 10.1371/journal.pone.0054874. Epub 2013 Jan 24. PMID:23365681
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (3gnm.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 3GNM
  • CSU: Contacts of Structural Units for 3GNM
  • Structure Factors (359 Kb)
  • Retrieve 3GNM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GNM from S2C, [Save to disk]
  • Re-refined 3gnm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GNM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gnm] [3gnm_H] [3gnm_L]
  • SWISS-PROT database:
  • Domains found in 3GNM: [IG_like] [IGv ] by SMART

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