3GPU		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8OG, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme., Qi Y, Spong MC, Nam K, Banerjee A, Jiralerspong S, Karplus M, Verdine GL, Nature. 2009 Dec 10;462(7274):762-6. PMID:20010681

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (3gpu.pdb1.gz) 56 Kb LPC: Ligand-Protein Contacts for 3GPU CSU: Contacts of Structural Units for 3GPU Structure Factors (420 Kb) Retrieve 3GPU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GPU from S2C, [Save to disk] Re-refined 3gpu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GPU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gpu] [3gpu_A] [3gpu_B] [3gpu_C] SWISS-PROT database: [P84131] Domains found in 3GPU: [Fapy_DNA_glyco] [H2TH ] by SMART

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