3GX1 Structural Genomics, Unknown Function date Apr 01, 2009
title Crystal Structure Of A Domain Of Lin1832 From Listeria Innoc
authors K.Tan, E.Rakowski, G.Cobb, A.Joachimiak, Midwest Center For Stru Genomics (Mcsg)
compound source
Molecule: Lin1832 Protein
Chain: A, B
Fragment: Domain: Unp Residues 542-668
Engineered: Yes
 Organism_scientific: Listeria Innocua Clip11262
Organism_taxid: 272626
Strain: Clip11262 Serovar 6a
Gene: Lin1832
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ppk1037
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg19
symmetry Space Group: P 41 21 2
R_factor 0.212 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.852 152.852 45.236 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (3gx1.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 3GX1
  • CSU: Contacts of Structural Units for 3GX1
  • Likely Quarternary Molecular Structure file(s) for 3GX1
  • Structure Factors (347 Kb)
  • Retrieve 3GX1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GX1 from S2C, [Save to disk]
  • Re-refined 3gx1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GX1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3GX1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GX1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gx1] [3gx1_A] [3gx1_B]
  • SWISS-PROT database: [Q92AT7]
  • Domain organization of [Q92AT7_LISIN] by SWISSPFAM
    • Other resources with information on 3GX1
  • Community annotation for 3GX1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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