3H4K Oxidoreductase date Apr 20, 2009
title Crystal Structure Of The Wild Type Thioredoxin Glutatione Re From Schistosoma Mansoni In Complex With Auranofin
authors F.Angelucci, D.Dimastrogiovanni, A.E.Miele, G.Boumis, M.Brunori, A.Bellelli
compound source
Molecule: Thioredoxin Glutathione Reductase
Chain: A
Ec: 1.6.4.5
Engineered: Yes
Organism_scientific: Schistosoma Mansoni
Organism_common: Blood Fluke
Organism_taxid: 6183
Gene: Tgr
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Blr(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcr2.1, Prset A
symmetry Space Group: C 1 2 1
R_factor 0.230 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.515 102.166 60.572 90.00 114.16 90.00
method X-Ray Diffractionresolution 2.55 Å
ligand AU, FAD, GSH, K, PG4 enzyme Oxidoreductase E.C.1.6.4.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • thioredoxin-disulfide reduct...
  • electron transfer activity


  • Primary referenceInhibition of Schistosoma mansoni thioredoxin-glutathione reductase by auranofin: structural and kinetic aspects., Angelucci F, Sayed AA, Williams DL, Boumis G, Brunori M, Dimastrogiovanni D, Miele AE, Pauly F, Bellelli A, J Biol Chem. 2009 Oct 16;284(42):28977-85. Epub 2009 Aug 26. PMID:19710012
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (3h4k.pdb1.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 3H4K
  • CSU: Contacts of Structural Units for 3H4K
  • Structure Factors (359 Kb)
  • Retrieve 3H4K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3H4K from S2C, [Save to disk]
  • Re-refined 3h4k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3H4K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3H4K
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3H4K, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3h4k_A] [3h4k]
  • SWISS-PROT database: [Q962Y6]
  • Domain organization of [Q962Y6_SCHMA] by SWISSPFAM
  • Other resources with information on 3H4K
  • Community annotation for 3H4K at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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