3HFI Structural Genomics, Unknown Function date May 11, 2009
title The Crystal Structure Of The Putative Regulator From Escheri Cft073
authors R.Zhang, X.Xu, H.Zheng, A.Savchenko, A.Edwards, A.Joachimiak, Midw Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative Regulator
Chain: A
Fragment: Residues 82-251
Engineered: Yes
Organism_scientific: Escherichia Coli O6
Organism_taxid: 217992
Strain: Cft073
Gene: C4276, Gi:26250098
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 63 2 2
R_factor 0.201 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.656 103.656 58.209 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (3hfi.pdb1.gz) 46 Kb
  • CSU: Contacts of Structural Units for 3HFI
  • Likely Quarternary Molecular Structure file(s) for 3HFI
  • Structure Factors (71 Kb)
  • Retrieve 3HFI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HFI from S2C, [Save to disk]
  • Re-refined 3hfi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HFI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HFI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HFI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hfi_A] [3hfi]
  • SWISS-PROT database: [Q8FCM7]
  • Domain organization of [Q8FCM7_ECOL6] by SWISSPFAM
  • Domain found in 3HFI: [UTRA ] by SMART
  • Other resources with information on 3HFI
  • Community annotation for 3HFI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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