3HG9 Structural Genomics, Unknown Function date May 13, 2009
title Crystal Structure Of Putative Pilm Protein From Pseudomonas 2192
authors V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo, New Y Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Pilm
Chain: A, B
Engineered: Yes
 Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Strain: 2192
Gene: Pilm, Cp42
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Codon+Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bc-Psgx3(Bc)
symmetry Space Group: P 62
R_factor 0.235 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.516 64.516 143.134 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
ligand NI enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (3hg9.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 3HG9
  • CSU: Contacts of Structural Units for 3HG9
  • Likely Quarternary Molecular Structure file(s) for 3HG9
  • Structure Factors (334 Kb)
  • Retrieve 3HG9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HG9 from S2C, [Save to disk]
  • Re-refined 3hg9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3HG9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3HG9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HG9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hg9_B] [3hg9_A] [3hg9]
  • SWISS-PROT database: [A3LKR8]
  • Domain organization of [A3LKR8_PSEAE] by SWISSPFAM
    • Other resources with information on 3HG9
  • Community annotation for 3HG9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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