3HNB	Blood Clotting	date	May 31, 2009
title	Factor Viii Trp2313-His2315 Segment Is Involved In Membrane Shown By Crystal Structure Of Complex Between Factor Viii C And An Inhibitor
authors	Z.Liu, C.Yuan
compound		source
Molecule: Coagulation Factor Viii Chain: M Fragment: C2 Domain Of Factor Viiia Light Chain, Unp Residu 2347; Synonym: Recombine Factor Viii, Procoagulant Component, Antihemophilic Factor, Ahf; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F8 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: Gs115 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppic9k
symmetry	Space Group: P 21 21 21	R_factor 0.185 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.054 55.775 67.971 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.15 Å
ligand	768 BindingDB	enzyme
Primary reference	Trp2313-His2315 of factor VIII C2 domain is involved in membrane binding: structure of a complex between the C2 domain and an inhibitor of membrane binding., Liu Z, Lin L, Yuan C, Nicolaes GA, Chen L, Meehan EJ, Furie B, Furie B, Huang M, J Biol Chem. 2010 Mar 19;285(12):8824-9. Epub 2010 Jan 20. PMID:20089867

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (3hnb.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 3HNB CSU: Contacts of Structural Units for 3HNB Structure Factors (778 Kb) Retrieve 3HNB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HNB from S2C, [Save to disk] Re-refined 3hnb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HNB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HNB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HNB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hnb_M] [3hnb] SWISS-PROT database: [P00451] Domain organization of [FA8_HUMAN] by SWISSPFAM Domain found in 3HNB: [FA58C ] by SMART

Other resources with information on 3HNB

Community annotation for 3HNB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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