3HRH Hydrolase date Jun 09, 2009
title Crystal Structure Of Antigen 85c And Glycerol
authors J.Boucau, A.K.Sanki, F.E.Umesiri, S.J.Sucheck, D.R.Ronning
compound source
Molecule: Antigen 85-C
Chain: A, B
Synonym: Antigen 85 Complex C, Ag85c, 85c, Mycolyl Transfer Fibronectin-Binding Protein C;
Ec: 2.3.1.-
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Fbpc, Fbpc2, Mpt45, Mt0137, Mtci5.03c, Rv0129c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 21 21 21
R_factor 0.190 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.777 80.278 136.835 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand GOL enzyme Transferase E.C.2.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign, synthesis and biological evaluation of sugar-derived esters, alpha-ketoesters and alpha-ketoamides as inhibitors for Mycobacterium tuberculosis antigen 85C., Sanki AK, Boucau J, Umesiri FE, Ronning DR, Sucheck SJ, Mol Biosyst. 2009 Sep;5(9):945-56. Epub 2009 Jun 19. PMID:19668859
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (3hrh.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (3hrh.pdb2.gz) 45 Kb
  • Biological Unit Coordinates (3hrh.pdb3.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 3HRH
  • CSU: Contacts of Structural Units for 3HRH
  • Structure Factors (283 Kb)
  • Retrieve 3HRH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HRH from S2C, [Save to disk]
  • Re-refined 3hrh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HRH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HRH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HRH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hrh_B] [3hrh_A] [3hrh]
  • SWISS-PROT database: [P0A4V4]
  • Domain organization of [A85C_MYCTU] by SWISSPFAM
  • Other resources with information on 3HRH
  • Community annotation for 3HRH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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