3HSV	Protein Binding, Ligase	date	Jun 10, 2009
title	Structures Of Spop-Substrate Complexes: Insights Into Molecu Architectures Of Btb-Cul3 Ubiquitin Ligases: Spopmathx- Macroh2asbcpep2
authors	M.Zhuang, B.A.Schulman, D.Miller
compound		source
Molecule: Speckle-Type Poz Protein Chain: A, B Synonym: Hib Homolog 1,Roadkill Homolog 1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Spop Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
Molecule: Core Histone Macro-H2a.1 Chain: M Synonym: Mh2a1,Histone H2a.Y,H2ay,Medulloblastoma Antigen 50.205; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: C 1 2 1	R_factor 0.174 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.953 43.086 87.453 90.00 118.15 90.00
method	X-Ray Diffraction	resolution	1.43 Å
ligand	ACE, SO4, ZN	enzyme
Primary reference	Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases., Zhuang M, Calabrese MF, Liu J, Waddell MB, Nourse A, Hammel M, Miller DJ, Walden H, Duda DM, Seyedin SN, Hoggard T, Harper JW, White KP, Schulman BA, Mol Cell. 2009 Oct 9;36(1):39-50. PMID:19818708

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (3hsv.pdb1.gz) 105 Kb LPC: Ligand-Protein Contacts for 3HSV CSU: Contacts of Structural Units for 3HSV Structure Factors (362 Kb) Retrieve 3HSV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HSV from S2C, [Save to disk] Re-refined 3hsv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HSV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HSV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HSV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hsv_A] [3hsv] [3hsv_M] [3hsv_B] SWISS-PROT database: [O75367] [Q5NVK7] Domain organization of [H2AY_HUMAN] [SPOP_PONAB] by SWISSPFAM Domain found in 3HSV: [MATH ] by SMART

Other resources with information on 3HSV

Community annotation for 3HSV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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