3HU2	Transport Protein	date	Jun 12, 2009
title	Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
authors	W.K.Tang
compound		source
Molecule: Transitional Endoplasmic Reticulum Atpase Chain: A, B, C, D, E, F Fragment: Residues 1-481 Synonym: Ter Atpase, 15s Mg(2+)-Atpase P97 Subunit, Valosin Containing Protein, Vcp; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Human Gene: P97, Vcp Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M15 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe60
symmetry	Space Group: P 1	R_factor 0.258 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.892 102.645 107.182 97.52 90.63 91.45
method	X-Ray Diffraction	resolution	2.85 Å
ligand	AGS, MG	enzyme
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	A novel ATP-dependent conformation in p97 N-D1 fragment revealed by crystal structures of disease-related mutants., Tang WK, Li D, Li CC, Esser L, Dai R, Guo L, Xia D, EMBO J. 2010 May 28. PMID:20512113

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk] Biological Unit Coordinates (3hu2.pdb1.gz) 409 Kb LPC: Ligand-Protein Contacts for 3HU2 CSU: Contacts of Structural Units for 3HU2 Structure Factors (960 Kb) Retrieve 3HU2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HU2 from S2C, [Save to disk] Re-refined 3hu2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HU2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3HU2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HU2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3hu2_C] [3hu2_A] [3hu2] [3hu2_B] [3hu2_F] [3hu2_D] [3hu2_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3HU2: [AAA] [CDC48_2] [CDC48_N ] by SMART

Other resources with information on 3HU2

Community annotation for 3HU2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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