3I3J	Transferase	date	Jun 30, 2009
title	Crystal Structure Of The Bromodomain Of Human Ep300
authors	P.Filippakopoulos, S.Picaud, C.Phillips, A.C.W.Pike, J.Muniz, A.R A.Chaikuad, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt C.Bountra, S.Knapp
compound		source
Molecule: Histone Acetyltransferase P300 Chain: A, B, C, D, E, F, G, H, I, J, K, L Fragment: Unp Residues 1040-1161 Synonym: P300 Hat, E1a-Associated Protein P300 Ec: 2.3.1.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ep300, P300 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 1 21 1	R_factor 0.229 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.899 86.186 149.897 90.00 96.98 90.00
method	X-Ray Diffraction	resolution	2.33 Å
ligand	CL, PEG, SO4	enzyme	Transferase E.C.2.3.1.48 BRENDA
Primary reference	Histone recognition and large-scale structural analysis of the human bromodomain family., Filippakopoulos P, Picaud S, Mangos M, Keates T, Lambert JP, Barsyte-Lovejoy D, Felletar I, Volkmer R, Muller S, Pawson T, Gingras AC, Arrowsmith CH, Knapp S, Cell. 2012 Mar 30;149(1):214-31. PMID:22464331

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (500 Kb) [Save to disk] Biological Unit Coordinates (3i3j.pdb1.gz) 43 Kb Biological Unit Coordinates (3i3j.pdb2.gz) 43 Kb Biological Unit Coordinates (3i3j.pdb3.gz) 44 Kb Biological Unit Coordinates (3i3j.pdb4.gz) 43 Kb Biological Unit Coordinates (3i3j.pdb5.gz) 41 Kb Biological Unit Coordinates (3i3j.pdb6.gz) 40 Kb Biological Unit Coordinates (3i3j.pdb7.gz) 43 Kb Biological Unit Coordinates (3i3j.pdb8.gz) 43 Kb Biological Unit Coordinates (3i3j.pdb9.gz) 43 Kb LPC: Ligand-Protein Contacts for 3I3J CSU: Contacts of Structural Units for 3I3J Likely Quarternary Molecular Structure file(s) for 3I3J Structure Factors (3157 Kb) Retrieve 3I3J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3I3J from S2C, [Save to disk] Re-refined 3i3j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3I3J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3I3J

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3I3J, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3i3j_I] [3i3j_D] [3i3j_J] [3i3j_K] [3i3j_L] [3i3j_H] [3i3j_B] [3i3j_G] [3i3j_A] [3i3j_E] [3i3j] [3i3j_F] [3i3j_C] SWISS-PROT database: [Q09472] Domain organization of [EP300_HUMAN] by SWISSPFAM Domain found in 3I3J: [BROMO ] by SMART

Other resources with information on 3I3J

Community annotation for 3I3J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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