3I47 Lyase date Jul 01, 2009
title Crystal Structure Of Putative Enoyl Coa Hydrataseisomerase (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Philadelphia 1
authors V.N.Malashkevich, R.Toro, C.Morano, J.M.Sauder, S.K.Burley, S.C.A York Sgx Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Enoyl Coa Hydrataseisomerase (Crotonase)
Chain: A
Ec: 4.2.1.17
Engineered: Yes
Organism_scientific: Legionella Pneumophila Subsp. Pneumoph
Organism_taxid: 272624
Strain: Philadelphia 1
Gene: Lpg1828
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Codon+Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bc-Psgx3(Bc)
symmetry Space Group: H 3 2
R_factor 0.168 R_Free 0.179
crystal
cell
length a length b length c angle alpha angle beta angle gamma
124.596 124.596 150.395 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.58 Å
ligand
enzyme Lyase E.C.4.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (3i47.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (3i47.pdb2.gz) 139 Kb
  • CSU: Contacts of Structural Units for 3I47
  • Likely Quarternary Molecular Structure file(s) for 3I47
  • Structure Factors (1600 Kb)
  • Retrieve 3I47 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I47 from S2C, [Save to disk]
  • Re-refined 3i47 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3I47 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3I47
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I47, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i47] [3i47_A]
  • SWISS-PROT database: [Q5ZUH0]
  • Domain organization of [Q5ZUH0_LEGPH] by SWISSPFAM
  • Other resources with information on 3I47
  • Community annotation for 3I47 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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