3I79	Transferase	date	Jul 08, 2009
title	Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (T
authors	E.T.Larson, E.A.Merritt, Medical Structural Genomics Of Pathog Protozoa (Msgpp)
compound		source
Molecule: Calmodulin-Domain Protein Kinase 1 Chain: A Fragment: Residues 30-507 Ec: 2.7.11.17 Engineered: Yes		Organism_scientific: Toxoplasma Gondii Organism_taxid: 5811 Gene: Cdpk1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ava0421
symmetry	Space Group: P 1 21 1	R_factor 0.213 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.144 71.861 67.265 90.00 102.98 90.00
method	X-Ray Diffraction	resolution	2.04 Å
ligand	EDO	enzyme	Transferase E.C.2.7.11.17 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Toxoplasma gondii calcium-dependent protein kinase 1 is a target for selective kinase inhibitors., Ojo KK, Larson ET, Keyloun KR, Castaneda LJ, Derocher AE, Inampudi KK, Kim JE, Arakaki TL, Murphy RC, Zhang L, Napuli AJ, Maly DJ, Verlinde CL, Buckner FS, Parsons M, Hol WG, Merritt EA, Van Voorhis WC, Nat Struct Mol Biol. 2010 May;17(5):602-7. Epub 2010 May 2. PMID:20436472

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk] Biological Unit Coordinates (3i79.pdb1.gz) 75 Kb LPC: Ligand-Protein Contacts for 3I79 CSU: Contacts of Structural Units for 3I79 Structure Factors (1839 Kb) Retrieve 3I79 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3I79 from S2C, [Save to disk] Re-refined 3i79 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3I79 in 3D

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Visual 3D analysis of 3I79

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3I79, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3i79_A] [3i79] SWISS-PROT database: [Q9BJF5] Domain organization of [Q9BJF5_TOXGO] by SWISSPFAM Domains found in 3I79: [EFh] [S_TKc ] by SMART

Other resources with information on 3I79

Community annotation for 3I79 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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