3IA5 Oxidoreductase date Jul 13, 2009
title Moritella Profunda Dihydrofolate Reductase (Dhfr)
authors S.Hay, R.M.Evans, C.Levy, X.Wang, E.J.Loveridge, D.Leys, R.K.Allem N.S.Scrutton
compound source
Molecule: Dihydrofolate Reductase
Chain: A, B
Ec: 1.5.1.3
Engineered: Yes
Organism_scientific: Moritella Profunda
Organism_taxid: 111291
Gene: Dyra
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41
R_factor 0.189 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.728 94.728 45.912 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand PO4 enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAre the Catalytic Properties of Enzymes from Piezophilic Organisms Pressure Adapted?, Hay S, Evans RM, Levy C, Loveridge EJ, Wang X, Leys D, Allemann RK, Scrutton NS, Chembiochem. 2009 Aug 13. PMID:19681091
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (3ia5.pdb1.gz) 27 Kb
  • Biological Unit Coordinates (3ia5.pdb2.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 3IA5
  • CSU: Contacts of Structural Units for 3IA5
  • Likely Quarternary Molecular Structure file(s) for 3IA5
  • Structure Factors (136 Kb)
  • Retrieve 3IA5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3IA5 from S2C, [Save to disk]
  • Re-refined 3ia5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3IA5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3IA5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3IA5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ia5] [3ia5_B] [3ia5_A]
  • SWISS-PROT database: [Q70YQ6]
  • Domain organization of [Q70YQ6_MORPR] by SWISSPFAM
  • Other resources with information on 3IA5
  • Community annotation for 3IA5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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