3ID5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SAM enzyme
Gene C04 ; C33
Gene
Ontology
ChainFunctionProcessComponent
A, E


F, B


G, C
  • ribonuclease P activity


  • Primary referenceStructural organization of box C/D RNA-guided RNA methyltransferase., Ye K, Jia R, Lin J, Ju M, Peng J, Xu A, Zhang L, Proc Natl Acad Sci U S A. 2009 Aug 5. PMID:19666563
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (3id5.pdb1.gz) 245 Kb
  • LPC: Ligand-Protein Contacts for 3ID5
  • CSU: Contacts of Structural Units for 3ID5
  • Structure Factors (312 Kb)
  • Retrieve 3ID5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ID5 from S2C, [Save to disk]
  • Re-refined 3id5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ID5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3id5] [3id5_A] [3id5_B] [3id5_C] [3id5_D] [3id5_E] [3id5_F] [3id5_G] [3id5_H]
  • SWISS-PROT database: [P58032] [Q97ZH3] [P55858]
  • Domains found in 3ID5: [Fibrillarin] [NOSIC ] by SMART

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