3IDC	Transferase	date	Jul 20, 2009
title	Crystal Structure Of (102-265)Riib:C Holoenzyme Of Camp-Depe Protein Kinase
authors	S.H.J.Brown, J.Wu, C.Kim, K.Alberto, S.S.Taylor
compound		source
Molecule: Camp-Dependent Protein Kinase Catalytic Subunit A Chain: A Fragment: Isoform 1 (C-Alpha-1): Unp Residues 2-351 Synonym: Pka C-Alpha Ec: 2.7.11.11 Engineered: Yes Other_details: (102-265)Riib:C Holoenzyme Of Camp-Dependent Kinase;		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Pkaca, Prkaca Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Prset
Molecule: Camp-Dependent Protein Kinase Type II-Beta Regula Subunit; Chain: B Fragment: Unp Residues 102-265 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Gene: Prkar2b Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Prset
symmetry	Space Group: C 1 2 1	R_factor 0.241 R_Free 0.319
crystal cell	length a length b length c angle alpha angle beta angle gamma 179.272 67.434 47.325 90.00 99.51 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	ANP, MN, SEP, TPO	enzyme	Transferase E.C.2.7.11.11 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Novel Isoform-Specific Interfaces Revealed by PKA RIIbeta Holoenzyme Structures., Brown SH, Wu J, Kim C, Alberto K, Taylor SS, J Mol Biol. 2009 Sep 11. PMID:19748511

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (3idc.pdb1.gz) 80 Kb LPC: Ligand-Protein Contacts for 3IDC CSU: Contacts of Structural Units for 3IDC Structure Factors (158 Kb) Retrieve 3IDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3IDC from S2C, [Save to disk] Re-refined 3idc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3IDC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3IDC

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3IDC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3idc] [3idc_A] [3idc_B] SWISS-PROT database: [P12369] [P05132] Domain organization of [KAP3_RAT] [KAPCA_MOUSE] by SWISSPFAM Domains found in 3IDC: [S_TK_X] [S_TKc] [cNMP ] by SMART

Other resources with information on 3IDC

Community annotation for 3IDC at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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