3IDX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EPE, GOL, NAG, SO4	enzyme
Gene Ontology	Chain Function Process Component G
Primary reference	Structural basis of immune evasion at the site of CD4 attachment on HIV-1 gp120., Chen L, Do Kwon Y, Zhou T, Wu X, O'Dell S, Cavacini L, Hessell AJ, Pancera M, Tang M, Xu L, Yang ZY, Zhang MY, Arthos J, Burton DR, Dimitrov DS, Nabel GJ, Posner MR, Sodroski J, Wyatt R, Mascola JR, Kwong PD, Science. 2009 Nov 20;326(5956):1123-7. PMID:19965434

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (264 Kb) [Save to disk] Biological Unit Coordinates (3idx.pdb1.gz) 256 Kb LPC: Ligand-Protein Contacts for 3IDX CSU: Contacts of Structural Units for 3IDX Structure Factors (401 Kb) Retrieve 3IDX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3IDX from S2C, [Save to disk] Re-refined 3idx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3IDX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3idx] [3idx_G] [3idx_H] [3idx_L] SWISS-PROT database: [P04578] Belongs to the human immunodeficiency virus type 1 (hiv-1) fusion peptide (hiv-fp) family according to TCDB. Domains found in 3IDX: [IG_like] [IGv ] by SMART

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