3J6G Structural Protein date Feb 19, 2014
title Minimized Average Structure Of Microtubules Stabilized By Ta
authors G.M.Alushin, G.C.Lander, E.H.Kellogg, R.Zhang, D.Baker, E.Nogales
compound source
Molecule: Tubulin Alpha-1a Chain
Chain: A, C, E, G, I, K, M, O, Q
Synonym: Alpha-Tubulin 1, Tubulin Alpha-1 Chain
 Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823

Molecule: Tubulin Beta Chain
Chain: B, D, F, H, J, L, N, P, R
Synonym: Beta-Tubulin
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.50 Å
ligand GDP, GTP, MG, TA1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, N, L, J, P, B, H, D, R


K, E, Q, M, C, A, O, I, G


Primary referenceHigh-Resolution Microtubule Structures Reveal the Structural Transitions in alphabeta-Tubulin upon GTP Hydrolysis., Alushin GM, Lander GC, Kellogg EH, Zhang R, Baker D, Nogales E, Cell. 2014 May 22;157(5):1117-29. doi: 10.1016/j.cell.2014.03.053. PMID:24855948
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1045 Kb) [Save to disk]
  • Biological Unit Coordinates (3j6g.pdb1.gz) 1031 Kb
  • LPC: Ligand-Protein Contacts for 3J6G
  • CSU: Contacts of Structural Units for 3J6G
  • Retrieve 3J6G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J6G from S2C, [Save to disk]
    • View 3J6G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3J6G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3J6G, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j6g_R] [3j6g_N] [3j6g_Q] [3j6g_I] [3j6g_G] [3j6g_O] [3j6g_F] [3j6g_P] [3j6g] [3j6g_J] [3j6g_B] [3j6g_E] [3j6g_D] [3j6g_M] [3j6g_L] [3j6g_H] [3j6g_K] [3j6g_A] [3j6g_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3J6G: [Tubulin] [Tubulin_C ] by SMART
    • Other resources with information on 3J6G
  • Community annotation for 3J6G at PDBWiki (http://pdbwiki.org)

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