3J70	Viral Protein Immune System	date	Apr 22, 2014
title	Model Of Gp120, Including Variable Regions, In Complex With 17b
authors	M.Rasheed, R.Bettadapura, C.Bajaj
compound		source
Molecule: Monoclonal Antibody 17b Light Chain Chain: A, M, R		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Monoclonal Antibody 17b Heavy Chain Chain: B, N, S		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: T-Cell Surface Glycoprotein Cd4 Chain: C, O, T Fragment: Unp Residues 26-208 Synonym: T-Cell Surface Antigen T4leu-3		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Envelope Glycoprotein Gp120 Chain: D, P, U Fragment: Unp Residues 31-500 Synonym: Surface Protein Gp120, Su, Glycoprotein 120, Gp120		Organism_scientific: Human Immunodeficiency Virus 1 Organism_common: Hiv-1 Organism_taxid: 11676
Molecule: Envelope Glycoprotein Gp41 Chain: E, Q, V Synonym: Transmembrane Protein Gp41, Tm, Glycoprotein 41, G		Organism_scientific: Human Immunodeficiency Virus 1 Organism_common: Hiv-1 Organism_taxid: 11676
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	NULL Å
Gene Ontology	Chain Function Process Component D, P, U O, T, C
Primary reference	Computational Refinement and Validation Protocol for Proteins with Large Variable Regions Applied to Model HIV Env Spike in CD4 and 17b Bound State., Rasheed M, Bettadapura R, Bajaj C, Structure. 2015 Jun 2;23(6):1138-49. doi: 10.1016/j.str.2015.03.026. PMID:26039348

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (452 Kb) [Save to disk] Biological Unit Coordinates (3j70.pdb1.gz) 447 Kb CSU: Contacts of Structural Units for 3J70 Retrieve 3J70 in mmCIF format [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j70_C] [3j70_Q] [3j70_P] [3j70_T] [3j70_D] [3j70_A] [3j70] [3j70_U] [3j70_E] [3j70_O] [3j70_S] [3j70_V] [3j70_N] [3j70_B] [3j70_M] [3j70_R] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3J70: [IG_like] [IGv ] by SMART

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