OCA Atlas for 3J7A

3J7A

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

34G, MG, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
1
2
3
4
5
6
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z

Primary reference

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine., Wong W, Bai XC, Brown A, Fernandez IS, Hanssen E, Condron M, Tan YH, Baum J, Scheres SH, Elife. 2014 Jun 9:e03080. doi: 10.7554/eLife.03080. PMID:24913268

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1382 Kb) [Save to disk]

Biological Unit Coordinates (3j7a.pdb1.gz) 1368 Kb

LPC: Ligand-Protein Contacts for 3J7A

CSU: Contacts of Structural Units for 3J7A

Retrieve 3J7A in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3J7A from S2C, [Save to disk]

View 3J7A in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3j7a] [3j7a_1] [3j7a_2] [3j7a_3] [3j7a_4] [3j7a_5] [3j7a_6] [3j7a_7] [3j7a_A] [3j7a_B] [3j7a_C] [3j7a_D] [3j7a_E] [3j7a_F] [3j7a_G] [3j7a_H] [3j7a_I] [3j7a_J] [3j7a_K] [3j7a_L] [3j7a_M] [3j7a_N] [3j7a_O] [3j7a_P] [3j7a_Q] [3j7a_R] [3j7a_S] [3j7a_T] [3j7a_U] [3j7a_V] [3j7a_W] [3j7a_X] [3j7a_Y] [3j7a_Z]

SWISS-PROT database:

Domains found in 3J7A: [KH] [KOW] [Ribosomal_S10] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S19e] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S4 ] by SMART

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