3JB9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, GDP, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • thiol-dependent ubiquitin-sp...
  • metallopeptidase activity
  • ubiquitin-like protein-speci...


    • B


    E, b

  • U1 snRNP
    • F, f

  • U1 snRNP
    • G, l

  • U1 snRNP
    • H, m

  • U1 snRNP
    • L

  • spliceosomal complex
    • M


    U, T, V, S


    W


    X

  • spliceosomal complex
    • Y


    Z, D

  • U1 snRNP
    • a


    c

  • U2-type spliceosomal complex...
    • d
  • peptidyl-prolyl cis-trans is...


    • e

  • spliceosomal complex
    • g


    h


    i

  • spliceosomal complex
    • j


    k


    n, I

  • U1 snRNP
    • o, J

  • U1 snRNP
    • r, R


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1739 Kb) [Save to disk]
  • Biological Unit Coordinates (3jb9.pdb1.gz) 1709 Kb
  • LPC: Ligand-Protein Contacts for 3JB9
  • CSU: Contacts of Structural Units for 3JB9
  • Retrieve 3JB9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JB9 from S2C, [Save to disk]
    • View 3JB9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3jb9_d] [3jb9_e] [3jb9_f] [3jb9_g] [3jb9] [3jb9_A] [3jb9_B] [3jb9_C] [3jb9_D] [3jb9_h] [3jb9_E] [3jb9_F] [3jb9_G] [3jb9_H] [3jb9_I] [3jb9_i] [3jb9_J] [3jb9_K] [3jb9_L] [3jb9_M] [3jb9_N] [3jb9_j] [3jb9_O] [3jb9_P] [3jb9_Q] [3jb9_k] [3jb9_R] [3jb9_S] [3jb9_T] [3jb9_U] [3jb9_V] [3jb9_W] [3jb9_X] [3jb9_l] [3jb9_Y] [3jb9_Z] [3jb9_a] [3jb9_b] [3jb9_m] [3jb9_c] [3jb9_n] [3jb9_o] [3jb9_r] [3jb9_x]
  • SWISS-PROT database:
  • Domains found in 3JB9: [EFG_C] [EFG_IV] [HAT] [JAB_MPN] [LRRcap] [RRM] [SANT] [Sm] [Ubox] [WD40] [ZnF_C3H1 ] by SMART

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