3JCR
date
authors
compound
source
symmetry
R_factor
R_Free
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
method
X-Ray Diffraction
resolution
Gene
Ontology
Chain
Function
Process
Component
2
catalytic step 2 spliceosome...
3
catalytic step 2 spliceosome...
4
5
6
7
8
A
metallopeptidase activity
isopeptidase activity
catalytic step 2 spliceosome...
B
C
U5 snRNP
catalytic step 2 spliceosome...
D
catalytic step 2 spliceosome...
E
F
U5 snRNP
catalytic step 2 spliceosome...
G
spliceosomal tri-snRNP compl...
U4/U6 x U5 tri-snRNP complex...
catalytic step 2 spliceosome...
I
J
spliceosomal tri-snRNP compl...
U4 snRNP
K
L
U4/U6 snRNP
O, o
catalytic step 2 spliceosome...
R, r
catalytic step 2 spliceosome...
S, s
catalytic step 2 spliceosome...
T, t
catalytic step 2 spliceosome...
U, u
catalytic step 2 spliceosome...
V
p, P
catalytic step 2 spliceosome...
q, Q
catalytic step 2 spliceosome...
Primary reference
Molecular architecture of the human U4/U6.U5 tri-snRNP., Agafonov DE, Kastner B, Dybkov O, Hofele RV, Liu WT, Urlaub H, Luhrmann R, Stark H, Science. 2016 Feb 18. pii: aad2085. PMID:
26912367
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(185 Kb)
[Save to disk]
Biological Unit Coordinates
(3jcr.pdb1.gz) 180 Kb
CSU:
Contacts of Structural Units
for 3JCR
Retrieve 3JCR in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
3JCR
from
S2C
,
[Save to disk]
View 3JCR in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[3jcr]
[3jcr_2]
[3jcr_3]
[3jcr_4]
[3jcr_5]
[3jcr_6]
[3jcr_7]
[3jcr_8]
[3jcr_A]
[3jcr_B]
[3jcr_C]
[3jcr_D]
[3jcr_E]
[3jcr_F]
[3jcr_G]
[3jcr_H]
[3jcr_I]
[3jcr_J]
[3jcr_K]
[3jcr_L]
[3jcr_M]
[3jcr_N]
[3jcr_O]
[3jcr_P]
[3jcr_Q]
[3jcr_R]
[3jcr_S]
[3jcr_T]
[3jcr_U]
[3jcr_V]
[3jcr_o]
[3jcr_p]
[3jcr_q]
[3jcr_r]
[3jcr_s]
[3jcr_t]
[3jcr_u]
SWISS-PROT
database:
Domains
found in 3JCR:
[AAA]
[DEXDc]
[DIM1]
[EFG_C]
[EFG_IV]
[HAT]
[HELICc]
[JAB_MPN]
[NOSIC]
[PWI]
[SFM]
[Sec63]
[Sm]
[WD40]
[ZnF_C2H2]
[ZnF_UBP ]
by
SMART
You may enter another PDB ID code
Go [
Back
], to the [
PDB Lite
page], to the [
OCA Search
page] or to the [
PDB Home
page]
OCA© by
Jaime Prilusky
, 1996-2014,2022,2024
Bioinformatics Unit
Weizmann Institute of Science