3JD5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component B C E F G I J K mitochondrial small ribosoma... L N O P Q R U a b c d e f g h i j k m n o p
Primary reference	Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome., Kaushal PS, Sharma MR, Booth TM, Haque EM, Tung CS, Sanbonmatsu KY, Spremulli LL, Agrawal RK, Proc Natl Acad Sci U S A. 2014 May 20;111(20):7284-9. doi:, 10.1073/pnas.1401657111. Epub 2014 May 5. PMID:24799711

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1083 Kb) [Save to disk] Biological Unit Coordinates (3jd5.pdb1.gz) 1077 Kb CSU: Contacts of Structural Units for 3JD5 Retrieve 3JD5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3JD5 from S2C, [Save to disk]

View 3JD5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3jd5] [3jd5_A] [3jd5_B] [3jd5_C] [3jd5_E] [3jd5_F] [3jd5_G] [3jd5_I] [3jd5_J] [3jd5_K] [3jd5_L] [3jd5_N] [3jd5_O] [3jd5_P] [3jd5_Q] [3jd5_R] [3jd5_U] [3jd5_a] [3jd5_b] [3jd5_c] [3jd5_d] [3jd5_e] [3jd5_f] [3jd5_g] [3jd5_h] [3jd5_i] [3jd5_j] [3jd5_k] [3jd5_m] [3jd5_n] [3jd5_o] [3jd5_p] [3jd5_s] [3jd5_z] SWISS-PROT database: Domains found in 3JD5: [DUF1713] [L51_S25_CI-B8] [Ribosomal_S10] [Ribosomal_S15] [S1 ] by SMART

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