3JUO Biosynthetic Protein date Sep 15, 2009
title Crystal Structure Of Phzab From Burkholderia Cepacia R18194 Complex With (R)-5-Bromo-2-(Piperidin-3-Ylamino)Benzoic Aci
authors M.Mentel, I.H.Jain, R.Breinbauer, W.Blankenfeldt
compound source
Molecule: Phenazine Biosynthesis Protein Ab
Chain: A, B
Engineered: Yes
Organism_scientific: Burkholderia Sp.
Organism_common: Burkholderia Cepacia (Strain Atcc 17760 R18194);
Organism_taxid: 269483
Strain: 383
Gene: Bcep18194_b1568
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta2(De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 32 2 1
R_factor 0.180 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.600 64.600 160.890 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand AJD enzyme
Gene BCEP18194
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe active site of an enzyme can host both enantiomers of a racemic ligand simultaneously., Mentel M, Blankenfeldt W, Breinbauer R, Angew Chem Int Ed Engl. 2009;48(48):9084-7. PMID:19876985
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3juo.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 3JUO
  • CSU: Contacts of Structural Units for 3JUO
  • Structure Factors (144 Kb)
  • Retrieve 3JUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3JUO from S2C, [Save to disk]
  • Re-refined 3juo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3JUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3JUO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3JUO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3juo_A] [3juo] [3juo_B]
  • SWISS-PROT database: [Q396C9]
  • Domain organization of [Q396C9_BURS3] by SWISSPFAM
  • Other resources with information on 3JUO
  • Community annotation for 3JUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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