3K1W Hydrolase date Sep 29, 2009
title New Classes Of Potent And Bioavailable Human Renin Inhibitor
authors L.Prade
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Cho Cell
symmetry Space Group: P 21 21 21
R_factor 0.199 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.028 88.697 118.307 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand BFX, CL, FMT, HSQ, NDG enzyme Hydrolase E.C.3.4.23.15 BRENDA
note 3K1W is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNew classes of potent and bioavailable human renin inhibitors., Remen L, Bezencon O, Richard-Bildstein S, Bur D, Prade L, Corminboeuf O, Boss C, Grisostomi C, Sifferlen T, Strickner P, Hess P, Delahaye S, Treiber A, Weller T, Binkert C, Steiner B, Fischli W, Bioorg Med Chem Lett. 2009 Dec 1;19(23):6762-5. Epub 2009 Oct 1. PMID:19853442
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (3k1w.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (3k1w.pdb2.gz) 61 Kb
  • Biological Unit Coordinates (3k1w.pdb3.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 3K1W
  • CSU: Contacts of Structural Units for 3K1W
  • Structure Factors (1298 Kb)
  • Retrieve 3K1W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3K1W from S2C, [Save to disk]
  • Re-refined 3k1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3K1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3K1W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3K1W, from MSDmotif at EBI
  • Fold representative 3k1w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3k1w] [3k1w_B] [3k1w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3K1W
  • Community annotation for 3K1W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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