3K3O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AKG, FE2 enzyme
Primary referenceStructural insights into a novel histone demethylase PHF8., Yu L, Wang Y, Huang S, Wang J, Deng Z, Zhang Q, Wu W, Zhang X, Liu Z, Gong W, Chen Z, Cell Res. 2010 Jan 26. PMID:20101266
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (3k3o.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 3K3O
  • CSU: Contacts of Structural Units for 3K3O
  • Structure Factors (148 Kb)
  • Retrieve 3K3O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3K3O from S2C, [Save to disk]
  • Re-refined 3k3o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3K3O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3k3o] [3k3o_A]
  • SWISS-PROT database: [Q9UPP1]
  • Domain found in 3K3O: [JmjC ] by SMART

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