OCA Atlas for 3K5K

3K5K

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, DXQ, SAH, UNX, ZN BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, B

Primary reference

Discovery of a 2,4-diamino-7-aminoalkoxyquinazoline as a potent and selective inhibitor of histone lysine methyltransferase G9a., Liu F, Chen X, Allali-Hassani A, Quinn AM, Wasney GA, Dong A, Barsyte D, Kozieradzki I, Senisterra G, Chau I, Siarheyeva A, Kireev DB, Jadhav A, Herold JM, Frye SV, Arrowsmith CH, Brown PJ, Simeonov A, Vedadi M, Jin J, J Med Chem. 2009 Dec 24;52(24):7950-3. PMID:19891491

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]

Biological Unit Coordinates (3k5k.pdb1.gz) 51 Kb

Biological Unit Coordinates (3k5k.pdb2.gz) 49 Kb

Biological Unit Coordinates (3k5k.pdb3.gz) 96 Kb

LPC: Ligand-Protein Contacts for 3K5K

CSU: Contacts of Structural Units for 3K5K

Structure Factors (999 Kb)

Retrieve 3K5K in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3K5K from S2C, [Save to disk]

Re-refined 3k5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3K5K in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3k5k] [3k5k_A] [3k5k_B]

SWISS-PROT database:

Domains found in 3K5K: [PostSET] [PreSET] [SET ] by SMART

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